Adding a new landmark pair selects that pair (row) in the table. Notes on point addition and landmark pair selection Some changes to landmarks can be done by interacting with the landmark table.ĭeletes a landmark pair (row in the table).ĭeletes all selected landmark pairs (row in the table). Landmark selection and editing in the table Toggle point name visibility in the viewer. Place a moving landmark from the fixed window, and vice versa. Add a landmark at the same location for both moving and target images. The release places a landmark point for the target image. The initial click places a landmark point for the moving image. Toggle between warped view and raw view or moving image.Ĭlicking while in landmark mode adds a landmark point or selects and existing landmark.Ĭlicking an existing point and dragging changes it's position. The following table shows the available commands and keystrokes for landmark Users place pairs of corresponding points on Landmark placements is done in Landmark mode which you enter by pressing Landmark point placement and display in the viewer Press F1 at any time to open a help page with a listing Re-navigate if the two image are very far apart: see the T to transform the moving image (you may need to After you have a few moving-target point pairs, press Point in the moving image, then click on the corresponding point in the target Once the two image windows and one table window open, press A dialog willĪppear prompting selection of the moving and target images.Īnd specify the paths to those images in the BigWarp dialog. Open two images in ImageJ, one moving and the other target and navigate to If this is not visible in your installation, try updating Fiji with The interface enables landmark pair placement and displays the effects ofīigWarp comes with Fiji. It uses the BigDataViewer for visualization andīuild a deformation from point correspondences. BigWarp is a tool for manual, interactive, landmark-based deformable imageĪlignment.
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